Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909543.1_cds_XP_016459743.1_53240
CDS Infomation

[gene=LOC107783281] [db_xref=GeneID:107783281] [protein=uncharacterized protein LOC107783281] [protein_id=XP_016459743.1] [location=join(14978..15606,16520..16619,17150..17486,18305..18417,18919..19047,19139..19232,19371..19481,20520..21139,21411..21661,24190..24340,25449..25546,25633..25714,26267..26350)] [gbkey=CDS]
Sequence

ATGATCGTTAGAACGTACGGCCGGCGTAGTAGAAGCATGTCCCGAAGCTACTCTGATTCA
GGCTTAAACGGCGATGTTTCAGAAGAAGGTTCTCAAGATATTTACAATTTTGGGTTTTCA
TCTCAAGACTCGGTTCACTGGAATAATTCAGATCCATACGCATATGATGCCGCCGGCTCA
TCTCAGGAATTGACGATTTTGCCCTCAAGAAAGGAAGATAGGGATGAGGATTTTTGGAAT
CCCAAGAAGGTGAAAAAGGTGTTTGATTGGGAGCCTTATAGTTTGAATTCATCCCAAGAA
TCGGACGAATTGGGGCAGAATGGTAATTTTGGCAAATTTGATGGGGGTTTACTAGAACCG
AAGAAGTTGAAGGGCAAGGAAAATGGGTTTTTACAGAAGAAGAAGAAGAAGGTCAAATCT
AAGGAGCTGGGATTGCCATCGCTGGGGCCCACGGCGACATTAATGGAGACACAAGAGTGT
GGTGAGATGATGGAACATATGGATGAGGTGAATTTTGCTTTGGATGGTTTAAGGAAAGGG
CAGCCTGTGAGGATCAGAAGGGCCAGTTTATTGTCATTGCTTTCTATATGTGGAACAGCT
CAGCAGCGTCGCCTGTTACGCGCTCACGGGATGGCAAAAACAATTATTGATGCTGTTTTG
GGACTCAGCTTCGATGACTCCCCTAGCAACCTTGCTGCAGCAGCTCTATTCTACATTTTG
ACCAGTGATGGAGGTGATGACCGGCTTCTTGATTCACCCAGCTGCATTCGCTTTCTTATA
AAATTGTTAAGACCGGTTGCCGCTCCTGCTCTGATAGCAAAGGCTCCAACTATTGGGAGC
AAGCTTTTAGCAATGCGCTTAGATGCTGATGTTTCTCAAGATAGTGTAAAAGGGCTAGAT
TCTACTTCCTCTTCAATAATAGGCAAGGTGCAGGAAGTTCTTGTTTCTTGCAAGGAAATA
AAGCCAAGTGATGGAAATGATGGACATGGCAGACCAGAGATAACCCCAAAATGGATTAGT
CTACTGACAATGGCAAAATCTTGCTTGTCTACTATCTCCATTGAAGATACTTCTGGCACT
GTGCGGAGAAGTGGGGGCAACTTCAAAGAAAAGCTGAGAGAGCTTGGAGGACTTGATGCG
GTCTTTGAGGTGGCAAGGAGTTGTCATTCTGTATTGGAGGGGTGGTCAGAGCTAAGCTTG
CAGTCCGTGTCAGATTCTAAAGATTATGCAGCCCTAGAAAGTCTGGTGCTGCTTTTAAAA
TGTTTGAAAATCATGGAAAACGCGACCTTTCTTAGTATGGACAATCAGACTCACTTGCTT
CAAATGAAAGGAAAATTAGATGGTCTGAACTCCCCAAGGTCTTTCACAAAGCTAATCTTA
AGCACGATCAAGATTCTCTCAGGTGCTTTCCTGCATAGAACTTCTTTGGACAGTTCCAAC
AATGGAAAAGTCTGTAACCTTTCAGCTGGAACTGCTCATGCTTCAGAATTACGTTCACTA
TCAGACAAGAAAGATGGAAATTGTCAGATTATGTGCATTGATTCTTCTACGACGTGCTAT
ACAAGTGAAGGTTCCTATTCTCAGAAGAACTTAGGTAGTGAAAATCGGATTGGTTCAGCC
GCATCCAATTTAGAGTCTGCTAGTACTTCCACCAGTGATTCTTGGCAGCTTAAATTGAGG
ATTGAATCTTCTAAGGATGGGTCATGTAGTGGAACCTCTGGGGCCTTCAGTTTTGGGGTC
AAGAAGAATTCATCAAGAGTGAGTTTTTCAATTGGTGATAGTCAAAGAAGTAATGGAGAG
AAGAGACTTGAGCTTATGGAAGAGAGTCAAGATCCTTTTGCATTTGATGATGAGTTTGAA
CCTTCACGATGGGATTTACTGTCTAAGCCAAAGGCGCCTCAAGCTCGAAGTAGGCAGACA
TCGTTTCTTGGACGCGATGATGAATACCAATCTCTCTCTGTGCTAAGCCAGCCAGAGTCA
AGTAGCCAGGAGAACAAACAAGAGTCAAGTAGCAAGGAGAACAAACAAGAGTCAAGTAGC
AAGGAGAACAATCAATCTGATCAGGCCTCTTGTTCTTCTGCAGATGAGGAAATGTCGACC
CTTCTGGCAGATTGCCTTCTCACATCTGTTAAAGTTCTGATGAACTTGACGAATGACAAC
CCTATGGGCTGTCAGCAAATTGCTGCCAGTGGTGGGCTGGAAGCTTTGTCTGCTTTGATT
GCTAGCCATTTCCCGTCCTTCAGCTTGCATATGGATTCTAATGGGTCACCAAAATCAGGT
GTAGTATCTGATAGTGAAGGTCATCTCAACGATCAAGAGCTAGATTTTCTTGTTGCTATT
TTGGGCTTGCTTGTTAATTTGGTGGAGAAGAATGGCTGCAACAGGTCGAGACTTGCAGCT
GCTAGTGTTTCATTGCCTGGATCAGAAGGTTTTGAGGGGGAGAGCCAGACAGATGTTATC
CCTCTGCTATGTGCAATCTTTCTGGCAAATCAAGGGGCTGGAGAGGCTGCTGAGGAAGGA
AAAAGTTTGCAATGGGATGATGAAGATGCTGTATTACAGGGAGAGAAAGAAGCTGAAAAA
ATGATTATAGAAGCTTATTCAGCTCTCCTTCTTGCCTTTCTTTCAACTGACAGCAAGAGC
ATACGACAGGCAATTGCTGGTTATTTACCAGATCATAATTTGTCCGTTCTTGTACCCGTG
CTGGAGAGATTTGTGGAATTTCACATGACGCTGAACATGATTTCACCGGAGACTCACTCA
GCAGTGCTTGAAGTTATAGAATCTTGTAGGGTTCGGTGA

Peptide Sequence

PEP ID

XP_016459743.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107783281 [Nicotiana tabacum]
Sequence

MIVRTYGRRSRSMSRSYSDSGLNGDVSEEGSQDIYNFGFSSQDSVHWNNSDPYAYDAAGS
SQELTILPSRKEDRDEDFWNPKKVKKVFDWEPYSLNSSQESDELGQNGNFGKFDGGLLEP
KKLKGKENGFLQKKKKKVKSKELGLPSLGPTATLMETQECGEMMEHMDEVNFALDGLRKG
QPVRIRRASLLSLLSICGTAQQRRLLRAHGMAKTIIDAVLGLSFDDSPSNLAAAALFYIL
TSDGGDDRLLDSPSCIRFLIKLLRPVAAPALIAKAPTIGSKLLAMRLDADVSQDSVKGLD
STSSSIIGKVQEVLVSCKEIKPSDGNDGHGRPEITPKWISLLTMAKSCLSTISIEDTSGT
VRRSGGNFKEKLRELGGLDAVFEVARSCHSVLEGWSELSLQSVSDSKDYAALESLVLLLK
CLKIMENATFLSMDNQTHLLQMKGKLDGLNSPRSFTKLILSTIKILSGAFLHRTSLDSSN
NGKVCNLSAGTAHASELRSLSDKKDGNCQIMCIDSSTTCYTSEGSYSQKNLGSENRIGSA
ASNLESASTSTSDSWQLKLRIESSKDGSCSGTSGAFSFGVKKNSSRVSFSIGDSQRSNGE
KRLELMEESQDPFAFDDEFEPSRWDLLSKPKAPQARSRQTSFLGRDDEYQSLSVLSQPES
SSQENKQESSSKENKQESSSKENNQSDQASCSSADEEMSTLLADCLLTSVKVLMNLTNDN
PMGCQQIAASGGLEALSALIASHFPSFSLHMDSNGSPKSGVVSDSEGHLNDQELDFLVAI
LGLLVNLVEKNGCNRSRLAAASVSLPGSEGFEGESQTDVIPLLCAIFLANQGAGEAAEEG
KSLQWDDEDAVLQGEKEAEKMIIEAYSALLLAFLSTDSKSIRQAIAGYLPDHNLSVLVPV
LERFVEFHMTLNMISPETHSAVLEVIESCRVR

Transcript Sequence

Gene sequence data has not been registered.